WABI 2025 Poster presentations
Poster presenters, please place your posters on the board marked by the number listed here for your poster.
Make the posters at most 4 ft wide and 3 ft high.
| Poster number | Authors | Title |
|---|---|---|
| 1 | Rossie S. Luo, Ellen E. Vaughan, Justin R. Clark, Anthony W. Maresso, Michael G. Nute and Todd J. Treangen | Strainify: Strain-Level Abundance Estimation for Short-read Metagenomics |
| 2 | Steven Tan, Sina Majidian, Ben Langmead and Mohsen Zakeri | Movi Color: fast and accurate long-read classification with the move structure |
| 3 | Peter Heringer and Daniel Doerr | Efficient data structures for coverage-based pangenome statistics |
| 4 | Sina Majidian and Ben Langmead | MetaKpick: machine learning–based metagenomic classification with multi k-mer-based pangenome indexes information on submission |
| 5 | Ryan Doughty, Michael Tisza and Todd Treangen | bronko: ultra-rapid mapping-free detection of intrahost variation from viral amplicon sequencing data |
| 6 | Anning Cui, Mihai Pop and Manasa Annavaram | Exploring structural variants in microbiome communities through simplified graph representations |
| 7 | Michael X. Wang, Bryce Kille, Michael G. Nute and Todd J. Treangen | Seqwin: Identifying strain-specific signature sequences via minimizer graphs in 10s of thousands of microbial genomes |
| 8 | Mao-Jan Lin, Ben Langmead and Yana Safonova | Extending IGLoo to light chains: High-resolution analysis and assembly of IGK and IGL loci in lymphoblastoid cell lines with PacBio HiFi reads |
| 9 | Md Hasin Abrar, Paul Medvedev and Giorgio Vinciguerra | Efficiency of Learned Indexes on Genome Spectra |
| 10 | Nathaniel K. Brown, Lore Depuydt, Mohsen Zakeri, Anas Alhadi, Nour Allam, Dove Degleiter, Nithin Bharathi, Suchith Sridhar, Hamza Wahed, Travis Gagie and Benjamin Langmead | KeBaB: k-mer based breaking for finding long MEMs |
| 11 | Haonan Wu, Antonio Blanca and Paul Medvedev | A k-mer-based estimator of the substitution rate between repetitive sequences |
| 12 | Rachel Parsons, Jessica M. Storer and Erin K. Molloy | A novel pipeline for calling transposable elements presence/absence in repetitive regions from whole genome alignments |
| 13 | Elizabeth Hunter and Rob Patro | Quantifying uncertainty in metagenomic analysis: the impact of phylogenetic representation on classification entropy with Kraken2 |
| 14 | Nakyung Lee and Mihai Pop | Assessing the Impact of Database Quality on the Performance of Alignment-Based Sequence Search Tools |
| 15 | Sina Majidian, Stephen Hwang, Mohsen Zakeri and Ben Langmead | EvANI benchmarking workflow for evolutionary distance estimation |
| 16 | Yunzhuo Liu, Wesley Demontigny, Seyed Mohammad Saleh Ghaemi, Stratis Aloimonos, Jenan El-Hifnawi and Erin K. Molloy | Evaluating the impact of species tree shape on new and old methods for species tree estimation |
| 17 | Parth Dua, Rachel Parsons, Yunzhuo Liu and Erin K. Molloy | Evaluating gene tree-based methods for orthology inference and their impact on species tree estimation |
| 18 | Luiz Mata Lopez, Junyan Dai and Erin K. Molloy | Evaluating tumor phylogeny methods under single nucleotide and copy number changes |
| 19 | Nathalie Bonin, Rain Haworth and Mihai Pop | An Evaluation of DeepARG – Does Deep Learning Really Provide a Significant Improvement Over the Best Hit Approach? |
| 20 | Zahra Zare Jousheghani, Noor Pratap Singh and Rob Patro | Oarfish improves long-read RNA-seq quantification through enhanced probabilistic modeling of transcript abundance |
| 21 | Rain Haworth, Seth Commichaux and Mihai Pop | Towards adversarial robustness in biological sequence databases: identifying random mutations in 16S rRNA |
| 22 | Zhezhen Wang and Rob Patro | Spatial Data Structures for Representing and Compressing Spatial Transcriptomics data |
| 23 | Bunsho Koyano and Tetsuo Shibuya | Fast and Accurate Comparison of Protein Conformational Ensembles |